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BMCBI
2010
118views more  BMCBI 2010»
15 years 6 months ago
Testing for mean and correlation changes in microarray experiments: an application for pathway analysis
Background: Microarray experiments examine the change in transcript levels of tens of thousands of genes simultaneously. To derive meaningful data, biologists investigate the resp...
Mayer Alvo, Zhongzhu Liu, Andrew Williams, Carole ...
IDA
2009
Springer
16 years 1 months ago
Bayesian Robust PCA for Incomplete Data
Abstract. We present a probabilistic model for robust principal component analysis (PCA) in which the observation noise is modelled by Student-t distributions that are independent ...
Jaakko Luttinen, Alexander Ilin, Juha Karhunen
BMCBI
2010
153views more  BMCBI 2010»
15 years 6 months ago
Challenges in microarray class discovery: a comprehensive examination of normalization, gene selection and clustering
Background: Cluster analysis, and in particular hierarchical clustering, is widely used to extract information from gene expression data. The aim is to discover new classes, or su...
Eva Freyhult, Mattias Landfors, Jenny Önskog,...
BMCBI
2010
112views more  BMCBI 2010»
15 years 6 months ago
Knowledge-based analysis of microarrays for the discovery of transcriptional regulation relationships
Background: The large amount of high-throughput genomic data has facilitated the discovery of the regulatory relationships between transcription factors and their target genes. Wh...
Junhee Seok, Amit Kaushal, Ronald W. Davis, Wenzho...
SPIRE
2010
Springer
15 years 5 months ago
Fingerprinting Ratings for Collaborative Filtering - Theoretical and Empirical Analysis
Abstract. We consider fingerprinting methods for collaborative filtering (CF) systems. In general, CF systems show their real strength when supplied with enormous data sets. Earl...
Yoram Bachrach, Ralf Herbrich