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BMCBI
2007
93views more  BMCBI 2007»
15 years 7 months ago
The topology of metabolic isotope labeling networks
Background: Metabolic Flux Analysis (MFA) based on isotope labeling experiments (ILEs) is a widely established tool for determining fluxes in metabolic pathways. Isotope labeling ...
Michael Weitzel, Wolfgang Wiechert, Katharina N&ou...
227
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WWW
2006
ACM
16 years 8 months ago
Knowledge modeling and its application in life sciences: a tale of two ontologies
High throughput glycoproteomics, similar to genomics and proteomics, involves extremely large volumes of distributed, heterogeneous data as a basis for identification and quantifi...
Satya Sanket Sahoo, Christopher Thomas, Amit P. Sh...
202
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RECOMB
2005
Springer
16 years 7 months ago
Causal Inference of Regulator-Target Pairs by Gene Mapping of Expression Phenotypes
Background: Correlations between polymorphic markers and observed phenotypes provide the basis for mapping traits in quantitative genetics. When the phenotype is gene expression, ...
David Kulp, Manjunatha Jagalur
BIBE
2007
IEEE
128views Bioinformatics» more  BIBE 2007»
16 years 1 months ago
QOMA2: Optimizing the alignment of many sequences
Abstract—We consider the problem of aligning multiple protein sequences with the goal of maximizing the SP (Sum-of-Pairs) score, when the number of sequences is large. The QOMA (...
Xu Zhang, Tamer Kahveci
SIGSOFT
2005
ACM
16 years 8 months ago
Context- and path-sensitive memory leak detection
We present a context- and path-sensitive algorithm for detecting memory leaks in programs with explicit memory management. Our leak detection algorithm is based on an underlying e...
Yichen Xie, Alexander Aiken