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SOFTVIS
2010
ACM
15 years 6 months ago
Heapviz: interactive heap visualization for program understanding and debugging
Understanding the data structures in a program is crucial to understanding how the program works, or why it doesn't work. Inspecting the code that implements the data structu...
Edward Aftandilian, Sean Kelley, Connor Gramazio, ...
BMCBI
2007
135views more  BMCBI 2007»
15 years 6 months ago
Measuring similarities between gene expression profiles through new data transformations
Background: Clustering methods are widely used on gene expression data to categorize genes with similar expression profiles. Finding an appropriate (dis)similarity measure is crit...
Kyungpil Kim, Shibo Zhang, Keni Jiang, Li Cai, In-...
BMCBI
2010
135views more  BMCBI 2010»
15 years 6 months ago
Integration and visualization of systems biology data in context of the genome
Background: High-density tiling arrays and new sequencing technologies are generating rapidly increasing volumes of transcriptome and protein-DNA interaction data. Visualization a...
J. Christopher Bare, Tie Koide, David J. Reiss, Da...
BMCBI
2008
130views more  BMCBI 2008»
15 years 6 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
CGA
2006
15 years 6 months ago
The Distance-Similarity Metaphor in Region-Display Spatializations
n explore and understand abstract information spaces as if they were real geographic spaces. According to the distance-similarity metaphor1 one of the most popular spatial metaphor...
Sara Irina Fabrikant, Daniel R. Montello, David M....