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RECOMB
2006
Springer
16 years 6 months ago
Predicting Experimental Quantities in Protein Folding Kinetics Using Stochastic Roadmap Simulation
Abstract. This paper presents a new method for studying protein folding kinetics. It uses the recently introduced Stochastic Roadmap Simulation (SRS) method to estimate the transit...
Tsung-Han Chiang, Mehmet Serkan Apaydin, Douglas L...
OSDI
2008
ACM
16 years 6 months ago
Improving MapReduce Performance in Heterogeneous Environments
MapReduce is emerging as an important programming model for large-scale data-parallel applications such as web indexing, data mining, and scientific simulation. Hadoop is an open-...
Matei Zaharia, Andy Konwinski, Anthony D. Joseph, ...
ICALP
2009
Springer
16 years 6 months ago
A Distributed and Oblivious Heap
This paper shows how to build and maintain a distributed heap which we call SHELL. In contrast to standard heaps, our heap is oblivious in the sense that its structure only depends...
Christian Scheideler, Stefan Schmid
VLDB
2003
ACM
141views Database» more  VLDB 2003»
16 years 6 months ago
Computing complete answers to queries in the presence of limited access patterns
In data applications such as information integration, there can be limited access patterns to relations, i.e., binding patterns require values to be specified for certain attribut...
Chen Li
SIGMOD
2009
ACM
291views Database» more  SIGMOD 2009»
16 years 6 months ago
Partial join order optimization in the paraccel analytic database
The ParAccel Analytic DatabaseTM is a fast shared-nothing parallel relational database system with a columnar orientation, adaptive compression, memory-centric design, and an enha...
Yijou Chen, Richard L. Cole, William J. McKenna, S...