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BMCBI
2008
163views more  BMCBI 2008»
15 years 6 months ago
The Annotation, Mapping, Expression and Network (AMEN) suite of tools for molecular systems biology
Background: High-throughput genome biological experiments yield large and multifaceted datasets that require flexible and user-friendly analysis tools to facilitate their interpre...
Frédéric Chalmel, Michael Primig
CORR
2010
Springer
200views Education» more  CORR 2010»
15 years 6 months ago
Unified Compression-Based Acceleration of Edit-Distance Computation
The edit distance problem is a classical fundamental problem in computer science in general, and in combinatorial pattern matching in particular. The standard dynamic programming s...
Danny Hermelin, Gad M. Landau, Shir Landau, Oren W...
BMCBI
2006
182views more  BMCBI 2006»
15 years 6 months ago
AceTree: a tool for visual analysis of Caenorhabditis elegans embryogenesis
Background: The invariant lineage of the nematode Caenorhabditis elegans has potential as a powerful tool for the description of mutant phenotypes and gene expression patterns. We...
Thomas J. Boyle, Zhirong Bao, John I. Murray, Carl...
BMCBI
2006
150views more  BMCBI 2006»
15 years 6 months ago
CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between clos
Background: The recent accumulation of closely related genomic sequences provides a valuable resource for the elucidation of the evolutionary histories of various organisms. Howev...
Ikuo Uchiyama, Toshio Higuchi, Ichizo Kobayashi
IJFCS
2007
98views more  IJFCS 2007»
15 years 6 months ago
Modular Ranking Abstraction
Ranking Abstraction Ittai Balaban Computer Science Department, New York University, 251 Mercer St., New York, New York 10012, United States and Amir Pnueli Computer Science Departm...
Ittai Balaban, Amir Pnueli, Lenore D. Zuck