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RECOMB
2005
Springer
16 years 7 months ago
Information Theoretic Approaches to Whole Genome Phylogenies
We describe a novel method for efficient reconstruction of phylogenetic trees, based on sequences of whole genomes or proteomes, whose lengths may greatly vary. The core of our me...
David Burstein, Igor Ulitsky, Tamir Tuller, Benny ...
RECOMB
2005
Springer
16 years 7 months ago
Reconstruction of Reticulate Networks from Gene Trees
Abstract. One of the simplest evolutionary models has molecular sequences evolving from a common ancestor down a bifurcating phylogenetic tree, experiencing point-mutations along t...
Daniel H. Huson, Tobias H. Klöpper, Pete J. L...
RECOMB
2005
Springer
16 years 7 months ago
Learning Interpretable SVMs for Biological Sequence Classification
Background: Support Vector Machines (SVMs) ? using a variety of string kernels ? have been successfully applied to biological sequence classification problems. While SVMs achieve ...
Christin Schäfer, Gunnar Rätsch, Sö...
STOC
2005
ACM
135views Algorithms» more  STOC 2005»
16 years 7 months ago
On the bias of traceroute sampling: or, power-law degree distributions in regular graphs
Understanding the graph structure of the Internet is a crucial step for building accurate network models and designing efficient algorithms for Internet applications. Yet, obtaini...
Dimitris Achlioptas, Aaron Clauset, David Kempe, C...
STOC
2005
ACM
129views Algorithms» more  STOC 2005»
16 years 7 months ago
Learning with attribute costs
We study an extension of the "standard" learning models to settings where observing the value of an attribute has an associated cost (which might be different for differ...
Haim Kaplan, Eyal Kushilevitz, Yishay Mansour
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