Publicly-available data sets provide detailed and large-scale information on multiple types of molecular interaction networks in a number of model organisms. These multi-modal univ...
Background: A protein binding hot spot is a small cluster of residues tightly packed at the center of the interface between two interacting proteins. Though a hot spot constitutes...
Protein-protein interaction networks, particularly that of the yeast S. Cerevisiae, have recently been studied extensively. These networks seem to satisfy the small world property ...
Abstract— We describe how a graph grammar program for robotic self-assembly, together with measurements of kinetic rate data yield a Markov Process model of the dynamics of progr...
Abstract. We present a framework for modelling heterogeneous distributed systems using graph transformations in the Synchronized Hyperedge Replacement approach, which describes com...