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IPPS
2009
IEEE
16 years 1 months ago
Improving MPI-HMMER's scalability with parallel I/O
We present PIO-HMMER, an enhanced version of MPI-HMMER. PIO-HMMER improves on MPIHMMER’s scalability through the use of parallel I/O and a parallel file system. In addition, we...
John Paul Walters, Rohan Darole, Vipin Chaudhary
IPPS
2006
IEEE
16 years 15 days ago
Parallel ICA methods for EEG neuroimaging
HiPerSAT, a C++ library and tools, processes EEG data sets with ICA (Independent Component Analysis) methods. HiPerSAT uses BLAS, LAPACK, MPI and OpenMP to achieve a high performa...
D. B. Keith, C. C. Hoge, Robert M. Frank, Allen D....
SC
2005
ACM
16 years 1 days ago
A Scalable Distributed Parallel Breadth-First Search Algorithm on BlueGene/L
Many emerging large-scale data science applications require searching large graphs distributed across multiple memories and processors. This paper presents a distributed breadth...
Andy Yoo, Edmond Chow, Keith W. Henderson, Will Mc...
ICCS
2005
Springer
16 years 1 hour ago
Performance and Scalability Analysis of Cray X1 Vectorization and Multistreaming Optimization
Cray X1 Fortran and C/C++ compilers provide a number of loop transformations, notably vectorization and multistreaming, in order to exploit the multistreaming processor (MSP) hard...
Sadaf R. Alam, Jeffrey S. Vetter
ICDCS
2006
IEEE
16 years 16 days ago
In-Network Outlier Detection in Wireless Sensor Networks
To address the problem of unsupervised outlier detection in wireless sensor networks, we develop an algorithm that (1) is flexible with respect to the outlier definition, (2) wo...
Joel W. Branch, Boleslaw K. Szymanski, Chris Giann...