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ECCB
2008
IEEE
16 years 26 days ago
SIRENE: supervised inference of regulatory networks
Living cells are the product of gene expression programs that involve the regulated transcription of thousands of genes. The elucidation of transcriptional regulatory networks in ...
Fantine Mordelet, Jean-Philippe Vert
BMCBI
2006
125views more  BMCBI 2006»
15 years 6 months ago
Algebraic comparison of metabolic networks, phylogenetic inference, and metabolic innovation
Metabolic networks are naturally represented as directed hypergraphs in such a way that metabolites are nodes and enzyme-catalyzed reactions form (hyper)edges. The familiar operat...
Christian V. Forst, Christoph Flamm, Ivo L. Hofack...
WSDM
2010
ACM
214views Data Mining» more  WSDM 2010»
16 years 3 months ago
You are who you know: Inferring user profiles in Online Social Networks
Online social networks are now a popular way for users to connect, express themselves, and share content. Users in today's online social networks often post a profile, consis...
Alan Mislove, Bimal Viswanath, P. Krishna Gummadi,...
GECCO
2006
Springer
220views Optimization» more  GECCO 2006»
15 years 10 months ago
Comparing evolutionary algorithms on the problem of network inference
In this paper, we address the problem of finding gene regulatory networks from experimental DNA microarray data. We focus on the evaluation of the performance of different evoluti...
Christian Spieth, Rene Worzischek, Felix Streicher...
INFOCOM
2007
IEEE
16 years 22 days ago
Toward Optimal Network Fault Correction via End-to-End Inference
— We consider an end-to-end approach of inferring network faults that manifest in multiple protocol layers, with an optimization goal of minimizing the expected cost of correctin...
Patrick P. C. Lee, Vishal Misra, Dan Rubenstein