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RECOMB
2008
Springer
16 years 7 months ago
Limitations of Pseudogenes in Identifying Gene Losses
The loss of previously established genes has been proposed as a major force in evolutionary change. While the sequencing of many new species offers the opportunity to identify case...
James C. Costello, Mira V. Han, Matthew W. Hahn
RECOMB
2007
Springer
16 years 7 months ago
Support Vector Training of Protein Alignment Models
Abstract. Sequence to structure alignment is an important step in homology modeling of protein structures. Incorporation of features like secondary structure, solvent accessibility...
Chun-Nam John Yu, Thorsten Joachims, Ron Elber, Ja...
RECOMB
2005
Springer
16 years 7 months ago
Likely Scenarios of Intron Evolution
Whether common ancestors of eukaryotes and prokaryotes had introns is one of the oldest unanswered questions in molecular evolution. Recently completed genome sequences have been u...
Miklós Csürös
RECOMB
2005
Springer
16 years 7 months ago
Individual Gene Cluster Statistics in Noisy Maps
Abstract. Identification of homologous chromosomal regions is important for understanding evolutionary processes that shape genome evolution, such as genome rearrangements and larg...
Narayanan Raghupathy, Dannie Durand
RECOMB
2005
Springer
16 years 7 months ago
Comparison of Protein-Protein Interaction Confidence Assignment Schemes
Recent technological advances have enabled high-throughput measurements of protein-protein interactions in the cell, producing protein interaction networks for various species at a...
Silpa Suthram, Tomer Shlomi, Eytan Ruppin, Roded S...