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RECOMB
2003
Springer
16 years 6 months ago
Phylogenetically and spatially conserved word pairs associated with gene expression changes in yeasts
Background: Transcriptional regulation in eukaryotes often involves multiple transcription factors binding to the same transcription control region, and to understand the regulato...
Derek Y. Chiang, Alan M. Moses, Manolis Kamvysseli...
RECOMB
2003
Springer
16 years 6 months ago
Accurate detection of very sparse sequence motifs
Protein sequence alignments are more reliable the shorter the evolutionary distance. Here, we align distantly related proteins using many closely spaced intermediate sequences as ...
Andreas Heger, Michael Lappe, Liisa Holm
STOC
2007
ACM
142views Algorithms» more  STOC 2007»
16 years 6 months ago
Lower bounds for randomized read/write stream algorithms
Motivated by the capabilities of modern storage architectures, we consider the following generalization of the data stream model where the algorithm has sequential access to multi...
Paul Beame, T. S. Jayram, Atri Rudra
ICALP
2009
Springer
16 years 6 months ago
Sleep with Guilt and Work Faster to Minimize Flow Plus Energy
In this paper we extend the study of flow-energy scheduling to a model that allows both sleep management and speed scaling. Our main result is a sleep management algorithm called I...
Tak Wah Lam, Lap-Kei Lee, Hing-Fung Ting, Isaac Ka...
VLDB
2007
ACM
226views Database» more  VLDB 2007»
16 years 6 months ago
SciPort: An Adaptable Scientific Data Integration Platform for Collaborative Scientific Research
Scientific data are posing new challenges to data management due to the large volume, complexity and heterogeneity of the data. Meanwhile, scientific collaboration becomes increas...
Fusheng Wang, Pierre-Emmanuel Bourgue, Georg Hacke...
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