Whole genome comparison based on gene order has become a popular approach in comparative genomics. An important task in this field is the detection of gene clusters, i.e. sets of g...
Given two classifications, or lightweight ontologies, we compute the minimal mapping, namely the subset of all possible correspondences, called mapping elements, between them such ...
This paper presents a case study of numerical simulations in an easy-to-use matrix computation framework named Simple Interface for Library Collections (SILC), which allows users t...
A number of software packages are available for the construction of comprehensive human genetic maps. In this paper we parallelize the widely used package Genehunter. We restrict ...
In this paper, we consider a method of computing minimal models in circumscription using integer programming in propositional logic and first-order logic with domain closure axiom...