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BMCBI
2006
180views more  BMCBI 2006»
15 years 6 months ago
Building multiclass classifiers for remote homology detection and fold recognition
Motivation Protein remote homology prediction and fold recognition are central problems in computational biology. Supervised learning algorithms based on support vector machines a...
Huzefa Rangwala, George Karypis
BMCBI
2010
98views more  BMCBI 2010»
15 years 6 months ago
An optimized TOPS+ comparison method for enhanced TOPS models
nd: Although methods based on highly abstract descriptions of protein structures, such as VAST and TOPS, can perform very fast protein structure comparison, the results can lack a...
Mallika Veeramalai, David Gilbert, Gabriel Valient...
VLDB
2005
ACM
180views Database» more  VLDB 2005»
15 years 12 months ago
Cache-conscious Frequent Pattern Mining on a Modern Processor
In this paper, we examine the performance of frequent pattern mining algorithms on a modern processor. A detailed performance study reveals that even the best frequent pattern min...
Amol Ghoting, Gregory Buehrer, Srinivasan Parthasa...
BMCBI
2007
107views more  BMCBI 2007»
15 years 6 months ago
A general and efficient method for estimating continuous IBD functions for use in genome scans for QTL
Background: Identity by descent (IBD) matrix estimation is a central component in mapping of Quantitative Trait Loci (QTL) using variance component models. A large number of algor...
Francois Besnier, Örjan Carlborg
ICIP
2003
IEEE
16 years 8 months ago
An adaptive multigrid algorithm for region of interest diffuse optical tomography
Dueto diffuse nature of lightphotons, Diffuse Optical Tomography (DOT) image reconstruction is a challenging 3D problem with a relatively large number of unknowns and limited meas...
Murat Guven, Birsen Yazici, Xavier Intes, Britton ...