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FOCS
2008
IEEE
15 years 8 months ago
Set Covering with our Eyes Closed
Given a universe U of n elements and a weighted collection S of m subsets of U, the universal set cover problem is to a-priori map each element u ∈ U to a set S(u) ∈ S contain...
Fabrizio Grandoni, Anupam Gupta, Stefano Leonardi,...
BMCBI
2008
122views more  BMCBI 2008»
15 years 7 months ago
Grammar-based distance in progressive multiple sequence alignment
Background: We propose a multiple sequence alignment (MSA) algorithm and compare the alignment-quality and execution-time of the proposed algorithm with that of existing algorithm...
David J. Russell, Hasan H. Otu, Khalid Sayood
BMCBI
2010
134views more  BMCBI 2010»
15 years 7 months ago
BayesMotif: de novo protein sorting motif discovery from impure datasets
Background: Protein sorting is the process that newly synthesized proteins are transported to their target locations within or outside of the cell. This process is precisely regul...
Jianjun Hu, Fan Zhang
PC
2010
196views Management» more  PC 2010»
15 years 5 months ago
Solving path problems on the GPU
We consider the computation of shortest paths on Graphic Processing Units (GPUs). The blocked recursive elimination strategy we use is applicable to a class of algorithms (such as...
Aydin Buluç, John R. Gilbert, Ceren Budak
TMI
2008
66views more  TMI 2008»
15 years 7 months ago
Feature Normalization via Expectation Maximization and Unsupervised Nonparametric Classification For M-FISH Chromosome Images
Multicolor fluorescence in situ hybridization (M-FISH) techniques provide color karyotyping that allows simultaneous analysis of numerical and structural abnormalities of whole hum...
Hyohoon Choi, Alan C. Bovik, Kenneth R. Castleman
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