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PPOPP
1999
ACM
15 years 11 months ago
MagPIe: MPI's Collective Communication Operations for Clustered Wide Area Systems
Writing parallel applications for computational grids is a challenging task. To achieve good performance, algorithms designed for local area networks must be adapted to the differ...
Thilo Kielmann, Rutger F. H. Hofman, Henri E. Bal,...
CPM
1999
Springer
129views Combinatorics» more  CPM 1999»
15 years 11 months ago
On the Structure of Syntenic Distance
This paper examines some of the rich structure of the syntenic distance model of evolutionary distance, introduced by Ferretti et al. (1996). The syntenic distance between two gen...
David Liben-Nowell
IRREGULAR
1998
Springer
15 years 11 months ago
Modeling Dynamic Load Balancing in Molecular Dynamics to Achieve Scalable Parallel Execution
To achieve scalable parallel performance in Molecular Dynamics Simulation, we have modeled and implemented several dynamic spatial domain decomposition algorithms. The modeling is ...
Lars S. Nyland, Jan Prins, Ru Huai Yun, Jan Herman...
WSCG
2004
143views more  WSCG 2004»
15 years 8 months ago
View Dependent Stochastic Sampling for Efficient Rendering of Point Sampled Surfaces
In this paper we present a new technique for rendering very large datasets representing point-sampled surfaces. Rendering efficiency is considerably improved by using stochastic s...
Sushil Bhakar, Liang Luo, Sudhir P. Mudur
ISMB
1997
15 years 8 months ago
Hierarchical Protein Structure Superposition Using Both Secondary Structure and Atomic Representations
The structural comparison of proteins has become increasingly important as a means to identify protein motifs and fold families. In this paper we present a new algorithm for the c...
Amit Pal Singh, Douglas L. Brutlag