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RECOMB
2010
Springer
15 years 8 months ago
naiveBayesCall: An Efficient Model-Based Base-Calling Algorithm for High-Throughput Sequencing
Immense amounts of raw instrument data (i.e., images of fluorescence) are currently being generated using ultra high-throughput sequencing platforms. An important computational cha...
Wei-Chun Kao, Yun S. Song
COMGEO
2004
ACM
15 years 7 months ago
A local search approximation algorithm for k-means clustering
In k-means clustering we are given a set of n data points in d-dimensional space d and an integer k, and the problem is to determine a set of k points in d , called centers, to mi...
Tapas Kanungo, David M. Mount, Nathan S. Netanyahu...
GECCO
2004
Springer
164views Optimization» more  GECCO 2004»
16 years 14 days ago
Fuzzy Dominance Based Multi-objective GA-Simplex Hybrid Algorithms Applied to Gene Network Models
Hybrid algorithms that combine genetic algorithms with the Nelder-Mead simplex algorithm have been effective in solving certain optimization problems. In this article, we apply a s...
Praveen Koduru, Sanjoy Das, Stephen Welch, Judith ...
MSO
2003
15 years 8 months ago
Simulation based Development of Efficient Hardware for Sort based Algorithms
The use of sub-optimal digital systems can at times lead to high speed, efficient, costeffective structures that are sufficient to perform needed tasks. We describe here a system ...
Niklas Hansson, Jay H. Harris
TVLSI
2010
15 years 1 months ago
C-Pack: A High-Performance Microprocessor Cache Compression Algorithm
Microprocessor designers have been torn between tight constraints on the amount of on-chip cache memory and the high latency of off-chip memory, such as dynamic random access memor...
Xi Chen, Lei Yang, Robert P. Dick, Li Shang, Haris...