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184
Voted
SC
2000
ACM
15 years 11 months ago
Scalable Molecular Dynamics for Large Biomolecular Systems
We present an optimized parallelization scheme for molecular dynamics simulations of large biomolecular systems, implemented in the production-quality molecular dynamics program N...
Robert Brunner, James C. Phillips, Laxmikant V. Ka...
184
Voted
IPPS
1999
IEEE
15 years 11 months ago
Flexible Collective Operations for Distributed Object Groups
Collective operations on multiple distributed objects are a powerful means to coordinate parallel computations. In this paper we present an inheritance based approach to implement ...
Jörg Nolte
IPPS
1999
IEEE
15 years 11 months ago
BSP in CSP: Easy as ABC
Abstract. In this paper we describe how the language of Communicating Sequential Processes CSP has been applied to the analysis of a transport layer protocol used in the implementa...
Andrew C. Simpson, Jonathan M. D. Hill, Stephen R....
163
Voted
PVM
1999
Springer
15 years 11 months ago
Building MPI for Multi-Programming Systems Using Implicit Information
Abstract. With the growing importance of fast system area networks in the parallel community, it is becoming common for message passing programs to run in multi-programming environ...
Frederick C. Wong, Andrea C. Arpaci-Dusseau, David...
ICPP
1997
IEEE
15 years 11 months ago
Automatic Partitioning of Data and Computations on Scalable Shared Memory Multiprocessors
Abstract—This paper describes an algorithm for deriving data and computation partitions on scalable shared memory multiprocessors. The algorithm establishes affinity relationshi...
Sudarsan Tandri, Tarek S. Abdelrahman