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BMCBI
2008
105views more  BMCBI 2008»
15 years 6 months ago
Novel computational methods for increasing PCR primer design effectiveness in directed sequencing
Background: Polymerase chain reaction (PCR) is used in directed sequencing for the discovery of novel polymorphisms. As the first step in PCR directed sequencing, effective PCR pr...
Kelvin Li, Anushka Brownley, Timothy B. Stockwell,...
BMCBI
2008
214views more  BMCBI 2008»
15 years 6 months ago
Accelerating String Set Matching in FPGA Hardware for Bioinformatics Research
Background: This paper describes techniques for accelerating the performance of the string set matching problem with particular emphasis on applications in computational proteomic...
Yoginder S. Dandass, Shane C. Burgess, Mark Lawren...
CORR
2010
Springer
127views Education» more  CORR 2010»
15 years 6 months ago
MINRES-QLP: a Krylov subspace method for indefinite or singular symmetric systems
Abstract. CG, SYMMLQ, and MINRES are Krylov subspace methods for solving large symmetric systems of linear equations. CG (the conjugate-gradient method) is reliable on positive-def...
Sou-Cheng T. Choi, Christopher C. Paige, Michael A...
CORR
2008
Springer
96views Education» more  CORR 2008»
15 years 6 months ago
Performance Modeling and Evaluation for Information-Driven Networks
Information-driven networks include a large category of networking systems, where network nodes are aware of information delivered and thus can not only forward data packets but m...
Kui Wu, Yuming Jiang, Guoqiang Hu
BMCBI
2006
84views more  BMCBI 2006»
15 years 6 months ago
Inferring topology from clustering coefficients in protein-protein interaction networks
Background: Although protein-protein interaction networks determined with high-throughput methods are incomplete, they are commonly used to infer the topology of the complete inte...
Caroline C. Friedel, Ralf Zimmer
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