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BMCBI
2004
158views more  BMCBI 2004»
15 years 6 months ago
Improvement of alignment accuracy utilizing sequentially conserved motifs
Background: Multiple sequence alignment algorithms are very important tools in molecular biology today. Accurate alignment of proteins is central to several areas such as homology...
Saikat Chakrabarti, Nitin Bhardwaj, Prem A. Anand,...
JSA
2000
116views more  JSA 2000»
15 years 6 months ago
Distributed vector architectures
Integrating processors and main memory is a promising approach to increase system performance. Such integration provides very high memory bandwidth that can be exploited efficientl...
Stefanos Kaxiras
C3S2E
2010
ACM
15 years 5 months ago
McLab: an extensible compiler toolkit for MATLAB and related languages
MATLAB is a popular language for scientific computation. Effectively compiling MATLAB presents many challenges due to the dynamic nature of the language. We present McLab, an ext...
Andrew Casey, Jun Li, Jesse Doherty, Maxime Cheval...
ISPD
2012
ACM
283views Hardware» more  ISPD 2012»
14 years 2 months ago
Low-power gated bus synthesis for 3d ic via rectilinear shortest-path steiner graph
In this paper, we propose a new approach for gated bus synthesis [16] with minimum wire capacitance per transaction in three-dimensional (3D) ICs. The 3D IC technology connects di...
Chung-Kuan Cheng, Peng Du, Andrew B. Kahng, Shih-H...

Lecture Notes
1005views
17 years 6 months ago
Lectures on reconfigurable computing
Driven by recent innovations in Field-Programmable Gate Arrays (FPGAs), reconfigurable computing offers unique ways to accelerate key algorithms. FPGAs offer a programmable logic f...
Sherief Reda