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BMCBI
2008
96views more  BMCBI 2008»
15 years 7 months ago
Use of normalization methods for analysis of microarrays containing a high degree of gene effects
Background: High-throughput microarrays are widely used to study gene expression across tissues and developmental stages. Analysis of gene expression data is challenging in these ...
Terri T. Ni, William J. Lemon, Yu Shyr, Tao P. Zho...
BMCBI
2008
121views more  BMCBI 2008»
15 years 7 months ago
ReAlignerV: Web-based genomic alignment tool with high specificity and robustness estimated by species-specific insertion sequen
Background: Detecting conserved noncoding sequences (CNSs) across species highlights the functional elements. Alignment procedures combined with computational prediction of transc...
Hisakazu Iwama, Yukio Hori, Kensuke Matsumoto, Koj...
BMCBI
2006
114views more  BMCBI 2006»
15 years 7 months ago
A high level interface to SCOP and ASTRAL implemented in Python
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...
ISCA
2008
IEEE
119views Hardware» more  ISCA 2008»
15 years 7 months ago
Technology-Driven, Highly-Scalable Dragonfly Topology
Evolving technology and increasing pin-bandwidth motivate the use of high-radix routers to reduce the diameter, latency, and cost of interconnection networks. High-radix networks,...
John Kim, William J. Dally, Steve Scott, Dennis Ab...
JSAC
2006
165views more  JSAC 2006»
15 years 7 months ago
ALPi: A DDoS Defense System for High-Speed Networks
Distributed denial-of-service (DDoS) attacks pose a significant threat to the Internet. Most solutions proposed to-date face scalability problems as the size and speed of the netwo...
P. E. Ayres, H. Sun, H. Jonathan Chao, Wing Cheong...