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RECOMB
2005
Springer
16 years 7 months ago
A Practical Approach to Significance Assessment in Alignment with Gaps
Abstract. Current numerical methods for assessing the statistical significance of local alignments with gaps are time consuming. Analytical solutions thus far have been limited to ...
Nicholas Chia, Ralf Bundschuh
RECOMB
2005
Springer
16 years 7 months ago
Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks
Abstract. The interpretation of large-scale protein network data depends on our ability to identify significant sub-structures in the data, a computationally intensive task. Here w...
Jacob Scott, Trey Ideker, Richard M. Karp, Roded S...
RECOMB
2003
Springer
16 years 7 months ago
Towards optimally multiplexed applications of universal DNA tag systems
We study a design and optimization problem that occurs, for example, when single nucleotide polymorphisms (SNPs) are to be genotyped using a universal DNA tag array. The problem o...
Amir Ben-Dor, Tzvika Hartman, Benno Schwikowski, R...
CADE
2008
Springer
16 years 7 months ago
On Automating the Calculus of Relations
Relation algebras provide abstract equational axioms for the calculus of binary relations. They name an established area of mathematics with various applications in computer scienc...
Georg Struth, Peter Höfner
CADE
2008
Springer
16 years 7 months ago
MaLARea SG1- Machine Learner for Automated Reasoning with Semantic Guidance
This paper describes a system combining model-based and learning-based methods for automated reasoning in large theories, i.e. on a large number of problems that use many axioms, l...
Geoff Sutcliffe, Jirí Vyskocil, Josef Urban...