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CPHYSICS
2007
96views more  CPHYSICS 2007»
15 years 6 months ago
Simple models for biomembrane structure and dynamics
Simulation of biomembranes over length and time scales relevant to cellular biology is not currently feasible with molecular dynamics including full atomic detail. Barring an unfo...
Frank L. H. Brown
JALC
2006
95views more  JALC 2006»
15 years 6 months ago
On the Decidability of Model-Checking for P Systems
Membrane computing is a branch of molecular computing that aims to develop models and paradigms that are biologically motivated. It identifies an unconventional computing model, n...
Zhe Dang, Oscar H. Ibarra, Cheng Li, Gaoyan Xie
JSCIC
2008
107views more  JSCIC 2008»
15 years 6 months ago
A Hierarchy of Approximations of the Master Equation Scaled by a Size Parameter
Solutions of the master equation are approximated using a hierarchy of models based on the solution of ordinary differential equations: the macroscopic equations, the linear noise...
Lars Ferm, Per Lötstedt, Andreas Hellander
BMCBI
2005
152views more  BMCBI 2005»
15 years 6 months ago
An ant colony optimisation algorithm for the 2D and 3D hydrophobic polar protein folding problem
Background: The protein folding problem is a fundamental problems in computational molecular biology and biochemical physics. Various optimisation methods have been applied to for...
Alena Shmygelska, Holger H. Hoos
CCE
2005
15 years 6 months ago
Numerical simulation of stochastic gene circuits
Armed with increasingly fast supercomputers and greater knowledge of the molecular mechanisms of gene expression, it is now practical to numerically simulate complex networks of r...
Howard Salis, Yiannis N. Kaznessis