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BMCBI
2005
124views more  BMCBI 2005»
15 years 6 months ago
Tools enabling the elucidation of molecular pathways active in human disease: Application to Hepatitis C virus infection
Background: The extraction of biological knowledge from genome-scale data sets requires its analysis in the context of additional biological information. The importance of integra...
David J. Reiss, Iliana Avila-Campillo, Vesteinn Th...
RECOMB
2009
Springer
16 years 6 months ago
An Online Approach for Mining Collective Behaviors from Molecular Dynamics Simulations
Collective behavior involving distally separate regions in a protein is known to widely affect its function. In this paper, we present an online approach to study and characterize ...
Arvind Ramanathan, Pratul K. Agarwal, Maria Kurnik...
INFOCOM
2012
IEEE
13 years 8 months ago
Data gathering in networks of bacteria colonies: Collective sensing and relaying using molecular communication
Abstract—The prospect of new biological and industrial applications that require communication in micro-scale, encourages research on the design of bio-compatible communication n...
Arash Einolghozati, Mohsen Sardari, Ahmad Beirami,...
BMCBI
2011
14 years 9 months ago
Linear and non-linear dependencies between copy number aberrations and mRNA expression reveal distinct molecular pathways in Bre
Background: Elucidating the exact relationship between gene copy number and expression would enable identification of regulatory mechanisms of abnormal gene expression and biologi...
Hiroko K. Solvang, Ole Christian Lingjærde, ...
KDD
2009
ACM
132views Data Mining» more  KDD 2009»
16 years 6 months ago
Learning patterns in the dynamics of biological networks
Our dynamic graph-based relational mining approach has been developed to learn structural patterns in biological networks as they change over time. The analysis of dynamic network...
Chang Hun You, Lawrence B. Holder, Diane J. Cook