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» Graphs in molecular biology
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RECOMB
2010
Springer
16 years 1 months ago
IDBA - A Practical Iterative de Bruijn Graph De Novo Assembler
Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis ...
ISMB
2008
15 years 8 months ago
Protein complex identification by supervised graph local clustering
Yanjun Qi, Fernanda Balem, Christos Faloutsos, Jud...
SDM
2004
SIAM
211views Data Mining» more  SDM 2004»
15 years 7 months ago
Using Support Vector Machines for Classifying Large Sets of Multi-Represented Objects
Databases are a key technology for molecular biology which is a very data intensive discipline. Since molecular biological databases are rather heterogeneous, unification and data...
Hans-Peter Kriegel, Peer Kröger, Alexey Pryak...
GMP
2006
IEEE
108views Solid Modeling» more  GMP 2006»
16 years 6 days ago
Towards Unsupervised Segmentation of Semi-rigid Low-Resolution Molecular Surfaces
In this paper, we study a particular type of surface segmentation problem motivated by molecular biology applications. In particular, two input surfaces are given, coarsely modeli...
Yusu Wang, Leonidas J. Guibas
IPPS
1999
IEEE
15 years 10 months ago
Large Scale Simulation of Parallel Molecular Dynamics
This paper aims to describe the implementation of TAKAKAW, an efficient parallel application for the simulation of molecular dynamics designed to handle large proteins in biology....
Pierre-Eric Bernard, Thierry Gautier, Denis Trystr...