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PPOPP
2006
ACM
16 years 3 days ago
Performance characterization of molecular dynamics techniques for biomolecular simulations
Large-scale simulations and computational modeling using molecular dynamics (MD) continues to make significant impacts in the field of biology. It is well known that simulations...
Sadaf R. Alam, Jeffrey S. Vetter, Pratul K. Agarwa...
ICDM
2006
IEEE
166views Data Mining» more  ICDM 2006»
16 years 6 days ago
Mining Generalized Graph Patterns Based on User Examples
There has been a lot of recent interest in mining patterns from graphs. Often, the exact structure of the patterns of interest is not known. This happens, for example, when molecu...
Pavel Dmitriev, Carl Lagoze
NAR
2010
194views more  NAR 2010»
15 years 28 days ago
AltAnalyze and DomainGraph: analyzing and visualizing exon expression data
Alternative splicing is an important mechanism for increasing protein diversity. However, its functional effects are largely unknown. Here, we present our new software workflow co...
Dorothea Emig, Nathan Salomonis, Jan Baumbach, Tho...
DNA
2008
Springer
149views Bioinformatics» more  DNA 2008»
15 years 8 months ago
Connecting the Dots: Molecular Machinery for Distributed Robotics
Abstract. Nature is considered one promising area to search for inspiration in designing robotic systems. Some work in swarm robotics has tried to build systems that resemble distr...
Yuriy Brun, Dustin Reishus