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EJC
2006
15 years 6 months ago
Tracing a single user
Let g(n, r) be the maximum possible cardinality of a family F of subsets of {1, 2, . . . , n} so that given a union of at most r members of F, one can identify at least one of the...
Noga Alon, Vera Asodi
SIAMCOMP
2000
90views more  SIAMCOMP 2000»
15 years 5 months ago
From Gene Trees to Species Trees
This paper studies various algorithmic issues in reconstructing a species tree from gene trees under the duplication and the mutation cost model. This is a fundamental problem in c...
Bin Ma, Ming Li, Louxin Zhang
JCB
2006
125views more  JCB 2006»
15 years 6 months ago
Hypothesis Generation in Signaling Networks
Biological signaling networks comprise the chemical processes by which cells detect and respond to changes in their environment. Such networks have been implicated in the regulati...
Derek A. Ruths, Luay Nakhleh, M. Sriram Iyengar, S...
DAC
2011
ACM
14 years 6 months ago
Synchronous sequential computation with molecular reactions
Just as electronic systems implement computation in terms of voltage (energy per unit charge), molecular systems compute in terms of chemical concentrations (molecules per unit vo...
Hua Jiang, Marc D. Riedel, Keshab K. Parhi
GECCO
2008
Springer
158views Optimization» more  GECCO 2008»
15 years 7 months ago
Structure and parameter estimation for cell systems biology models
In this work we present a new methodology for structure and parameter estimation in cell systems biology modelling. Our modelling framework is based on P systems, an unconl comput...
Francisco José Romero-Campero, Hongqing Cao...