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GD
2005
Springer
15 years 12 months ago
MultiPlane: A New Framework for Drawing Graphs in Three Dimensions
This paper presents a new framework for drawing graphs in three dimensions. In general, the new framework uses a divide and conquer approach. More specifically, the framework divi...
Seok-Hee Hong
AB
2007
Springer
16 years 18 days ago
Relating Attractors and Singular Steady States in the Logical Analysis of Bioregulatory Networks
Abstract. In 1973 R. Thomas introduced a logical approach to modeling and analysis of bioregulatory networks. Given a set of Boolean functions describing the regulatory interaction...
Heike Siebert, Alexander Bockmayr
NAR
2006
129views more  NAR 2006»
15 years 6 months ago
AliWABA: alignment on the web through an A-Bruijn approach
Multiple sequence alignment programs are an invaluable tool in computational biology. A-Bruijn Alignment (ABA) is a method for multiple sequence alignment that represents an align...
Neil C. Jones, Degui Zhi, Benjamin J. Raphael
WADS
2009
Springer
232views Algorithms» more  WADS 2009»
16 years 1 months ago
On Making Directed Graphs Transitive
We present the first thorough theoretical analysis of the Transitivity Editing problem on digraphs. Herein, the task is to perform a minimum number of arc insertions or deletions ...
Mathias Weller, Christian Komusiewicz, Rolf Nieder...
FLAIRS
2006
15 years 7 months ago
Inexact Graph Matching: A Case of Study
Inexact graph matching has become an important research area because it is used to find similarities among objects in several real domains such as chemical and biological compound...
Ivan Olmos, Jesus A. Gonzalez, Mauricio Osorio