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BIOINFORMATICS
2008
172views more  BIOINFORMATICS 2008»
15 years 6 months ago
Fitting a geometric graph to a protein-protein interaction network
Motivation: Finding a good network null model for protein-protein interaction (PPI) networks is a fundamental issue. Such a model would provide insights into the interplay between...
Desmond J. Higham, Marija Rasajski, Natasa Przulj
KDD
2009
ACM
172views Data Mining» more  KDD 2009»
15 years 11 months ago
Learning dynamic temporal graphs for oil-production equipment monitoring system
Learning temporal graph structures from time series data reveals important dependency relationships between current observations and histories. Most previous work focuses on learn...
Yan Liu, Jayant R. Kalagnanam, Oivind Johnsen
PVLDB
2010
151views more  PVLDB 2010»
15 years 4 months ago
Scalable Discovery of Best Clusters on Large Graphs
The identification of clusters, well-connected components in a graph, is useful in many applications from biological function prediction to social community detection. However, ļ...
Kathy Macropol, Ambuj K. Singh
BMCBI
2006
199views more  BMCBI 2006»
15 years 6 months ago
PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments
Background: Microarray technology has become a widely accepted and standardized tool in biology. The first microarray data analysis programs were developed to support pair-wise co...
Björn Usadel, Axel Nagel, Dirk Steinhauser, Y...
ISMB
1997
15 years 7 months ago
Automated Alignment of RNA Sequences to Pseudoknotted Structures
Seq7 is a newprogramfor generating multiple structure-based alignments of RNAsequences. Byusing a variant of Dijkstra’s algorithm to find the shortest path through a specially c...
Jack E. Tabaska, Gary D. Stormo