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WABI
2007
Springer
16 years 28 days ago
Topology Independent Protein Structural Alignment
Abstract. Protein structural alignment is an indispensable tool used for many different studies in bioinformatics. Most structural alignment algorithms assume that the structural ...
Joe Dundas, T. Andrew Binkowski, Bhaskar DasGupta,...
AAAI
2010
15 years 8 months ago
Coalitional Structure Generation in Skill Games
We consider optimizing the coalition structure in Coalitional Skill Games (CSGs), a succinct representation of coalitional games (Bachrach and Rosenschein 2008). In CSGs, the valu...
Yoram Bachrach, Reshef Meir, Kyomin Jung, Pushmeet...
APBC
2007
110views Bioinformatics» more  APBC 2007»
15 years 8 months ago
Fast Structural Similarity Search Based on Topology String Matching
ibe an abstract data model of protein structures by representing the geometry of proteins using spatial data types and present a framework for fast structural similarity search bas...
Sung-Hee Park, David Gilbert, Keun Ho Ryu
INFORMATICALT
2007
127views more  INFORMATICALT 2007»
15 years 6 months ago
Composition of Loop Modules in the Structural Blanks Approach to Programming with Recurrences: A Task of Synthesis of Nested Loo
The paper presents, first, the Structural Blanks (SB) approach, then a method to compose loop programs. SB is an approach for expressing computations based on recurrence relations...
Vytautas Cyras
181
Voted
JSYML
2007
66views more  JSYML 2007»
15 years 6 months ago
Spectra of structures and relations
We consider embeddings of structures which preserve spectra: if g : M → S with S computable, then M should have the same Turing degree spectrum (as a structure) that g(M) has (a...
Valentina S. Harizanov, Russel G. Miller