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RECOMB
2006
Springer
16 years 7 months ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger
BMCBI
2007
118views more  BMCBI 2007»
15 years 6 months ago
A topological algorithm for identification of structural domains of proteins
Background: Identification of the structural domains of proteins is important for our understanding of the organizational principles and mechanisms of protein folding, and for ins...
Frank Emmert-Streib, Arcady R. Mushegian
HICSS
2010
IEEE
193views Biometrics» more  HICSS 2010»
16 years 1 months ago
The Topological and Electrical Structure of Power Grids
Numerous recent papers have found important relationships between network structure and risks within networks. These results indicate that network structure can dramatically affec...
Paul Hines, Seth Blumsack, E. Cotilla Sanchez, C. ...
CIKM
2009
Springer
16 years 1 months ago
P-Rank: a comprehensive structural similarity measure over information networks
With the ubiquity of information networks and their broad applications, the issue of similarity computation between entities of an information network arises and draws extensive r...
Peixiang Zhao, Jiawei Han, Yizhou Sun
CSB
2005
IEEE
114views Bioinformatics» more  CSB 2005»
16 years 8 days ago
Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes
Searching genomes for RNA secondary structure with computational methods has become an important approach to the annotation of non-coding RNAs. However, due to the lack of effici...
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fa...