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CF
2009
ACM
16 years 1 months ago
Scheduling dynamic parallelism on accelerators
Resource management on accelerator based systems is complicated by the disjoint nature of the main CPU and accelerator, which involves separate memory hierarhcies, different degr...
Filip Blagojevic, Costin Iancu, Katherine A. Yelic...
SSDBM
2006
IEEE
163views Database» more  SSDBM 2006»
16 years 27 days ago
ACache: Using Caching to Improve the Performance of Multiple Sequence Alignments
Multiple sequence alignment represents a class of powerful bioinformatics tools with many uses in computational biology ranging from discovery of characteristic motifs and conserv...
Xun Tu, Kajal T. Claypool, Cindy X. Chen
SAC
2006
ACM
16 years 25 days ago
Mining and analyzing the topological structure of protein-protein interaction networks
We report a comprehensive evaluation of the topological structure of protein-protein interaction (PPI) networks by mining and analyzing graphs constructed from the publicly availa...
Daniel Duanqing Wu, Xiaohua Hu
LSGRID
2004
Springer
16 years 7 days ago
Grid Portal Interface for Interactive Use and Monitoring of High-Throughput Proteome Annotation
High-throughput proteome annotation refers to the activity of extracting information from all proteins in a particular organism using bioinformatics software on a high performance ...
Atif Shahab, Danny Chuon, Toyotaro Suzumura, Wilfr...
VLDB
2004
ACM
114views Database» more  VLDB 2004»
16 years 6 days ago
Hardware Acceleration in Commercial Databases: A Case Study of Spatial Operations
Traditional databases have focused on the issue of reducing I/O cost as it is the bottleneck in many operations. As databases become increasingly accepted in areas such as Geograp...
Nagender Bandi, Chengyu Sun, Amr El Abbadi, Divyak...