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BMCBI
2007
233views more  BMCBI 2007»
15 years 7 months ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
BMCBI
2007
164views more  BMCBI 2007»
15 years 6 months ago
Comparison of probabilistic Boolean network and dynamic Bayesian network approaches for inferring gene regulatory networks
Background: The regulation of gene expression is achieved through gene regulatory networks (GRNs) in which collections of genes interact with one another and other substances in a...
Peng Li, Chaoyang Zhang, Edward J. Perkins, Ping G...
PR
2011
15 years 1 months ago
A sum-over-paths extension of edit distances accounting for all sequence alignments
This paper introduces a simple Sum-over-Paths (SoP) formulation of string edit distances accounting for all possible alignments between two sequences, and extends related previous...
Silvia García-Díez, François ...
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ICCV
2009
IEEE
16 years 11 months ago
Multimodal Partial Estimates Fusion
Fusing partial estimates is a critical and common problem in many computer vision tasks such as part-based detection and tracking. It generally becomes complicated and intractab...
Jiang Xu, Junsong Yuan, YingWu
ECCV
2008
Springer
16 years 8 months ago
An Experimental Comparison of Discrete and Continuous Shape Optimization Methods
Shape optimization is a problem which arises in numerous computer vision problems such as image segmentation and multiview reconstruction. In this paper, we focus on a certain clas...
Maria Klodt, Thomas Schoenemann, Kalin Kolev, Mare...