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SIGMOD
2004
ACM
88views Database» more  SIGMOD 2004»
16 years 6 months ago
Using Reasoning to Guide Annotation with Gene Ontology Terms in GOAT
High-quality annotation of biological data is central to bioinformatics. Annotation using terms from ontologies provides reliable computational access to data. The Gene Ontology (...
Michael Bada, Daniele Turi, Robin McEntire, Robert...
WABI
2009
Springer
128views Bioinformatics» more  WABI 2009»
16 years 1 months ago
Improving Inference of Transcriptional Regulatory Networks Based on Network Evolutionary Models
Abstract. Computational inference of transcriptional regulatory networks remains a challenging problem, in part due to the lack of strong network models. In this paper we present e...
Xiuwei Zhang, Bernard M. E. Moret
WABI
2009
Springer
130views Bioinformatics» more  WABI 2009»
16 years 1 months ago
Linear-Time Protein 3-D Structure Searching with Insertions and Deletions
It becomes more and more important to search for similar structures from molecular 3-D structure databases in the structural biology of the post genomic era. Two molecules are said...
Tetsuo Shibuya, Jesper Jansson, Kunihiko Sadakane
190
Voted
DEXA
2009
Springer
167views Database» more  DEXA 2009»
16 years 1 months ago
Alignment of Noisy and Uniformly Scaled Time Series
The alignment of noisy and uniformly scaled time series is an important but difficult task. Given two time series, one of which is a uniformly stretched subsequence of the other, w...
Constanze Lipowsky, Egor Dranischnikow, Herbert G&...
FQAS
2009
Springer
157views Database» more  FQAS 2009»
16 years 1 months ago
On Fuzzy vs. Metric Similarity Search in Complex Databases
Abstract. The task of similarity search is widely used in various areas of computing, including multimedia databases, data mining, bioinformatics, social networks, etc. For a long ...
Alan Eckhardt, Tomás Skopal, Peter Vojt&aac...