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IPPS
2006
IEEE
16 years 22 days ago
MT-ClustalW: multithreading multiple sequence alignment
ClustalW is the most widely used tool for aligning multiple protein or nucleotide sequences. The alignment is achieved via three stages: pairwise alignment, guide tree generation ...
K. Chaichoompu, Surin Kittitornkun, Sissades Tongs...
ESORICS
2005
Springer
16 years 7 days ago
Privacy Preserving Clustering
The freedom and transparency of information flow on the Internet has heightened concerns of privacy. Given a set of data items, clustering algorithms group similar items together...
Somesh Jha, Louis Kruger, Patrick McDaniel
WABI
2005
Springer
107views Bioinformatics» more  WABI 2005»
16 years 5 days ago
Linear Time Algorithm for Parsing RNA Secondary Structure
Abstract Baharak Rastegari and Anne Condon Department of Computer Science, University of British Columbia Abstract. Accurate prediction of pseudoknotted RNA secondary structure is ...
Baharak Rastegari, Anne Condon
SAC
2004
ACM
16 years 4 days ago
Classifying biological articles using web resources
Text classification systems on biomedical literature aim to select relevant articles to a specific issue from large corpora. Most systems with an acceptable accuracy are based o...
Francisco M. Couto, Bruno Martins, Mário J....
SAC
2004
ACM
16 years 4 days ago
Guiding motif discovery by iterative pattern refinement
In this paper, we demonstrate that the performance of a motif discovery algorithm can be significantly improved by embedding it into a novel framework that effectively guides the ...
Zhiping Wang, Mehmet M. Dalkilic, Sun Kim