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BMCBI
2008
135views more  BMCBI 2008»
15 years 6 months ago
Fregene: Simulation of realistic sequence-level data in populations and ascertained samples
Background: FREGENE simulates sequence-level data over large genomic regions in large populations. Because, unlike coalescent simulators, it works forwards through time, it allows...
Marc Chadeau-Hyam, Clive J. Hoggart, Paul F. O'Rei...
BMCBI
2008
149views more  BMCBI 2008»
15 years 5 months ago
MD-SeeGH: a platform for integrative analysis of multi-dimensional genomic data
Background: Recent advances in global genomic profiling methodologies have enabled multidimensional characterization of biological systems. Complete analysis of these genomic prof...
Bryan Chi, Ronald J. deLeeuw, Bradley P. Coe, Raym...
ICFP
2008
ACM
16 years 6 months ago
Pattern minimization problems over recursive data types
In the context of program verification in an interactive theorem prover, we study the problem of transforming function definitions with ML-style (possibly overlapping) pattern mat...
Alexander Krauss
SIGADA
2005
Springer
16 years 3 days ago
Experiences using SPARK in an undergraduate CS course
This paper describes experiences garnered while teaching a course on high integrity software using SPARK to a mix of junior and senior level undergraduates. The paper describes th...
Anthony S. Ruocco
APSEC
2002
IEEE
15 years 11 months ago
Contextual Matching of Software Library Components
Many automated programming environments construct software by integrating predefined components from a software library. A fundamental challenge in this process is to match the p...
Colin J. Fidge