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KBSE
2009
IEEE
16 years 1 months ago
A Case for Automated Debugging Using Data Structure Repair
—Automated debugging is becoming increasingly important as the size and complexity of software increases. This paper makes a case for using constraint-based data structure repair...
Muhammad Zubair Malik, Khalid Ghori, Bassem Elkara...
BIBE
2003
IEEE
133views Bioinformatics» more  BIBE 2003»
15 years 12 months ago
A Computational Pipeline for Protein Structure Prediction and Analysis at Genome Scale
The tertiary (3D) structure of a protein contains the essential information for understanding the biological function of the protein at the molecular and cellular levels. Traditio...
Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyl...
WWW
2008
ACM
16 years 7 months ago
StYLiD: Social Information Sharing with Free Creation of Structured Linked Data
Information sharing can be effective with structured data. The Semantic Web is mainly aimed at structuring information by creating widely accepted ontologies. However, users have ...
Aman Shakya, Hideaki Takeda, Vilas Wuwongse
NAR
2010
129views more  NAR 2010»
15 years 1 months ago
PROSESS: a protein structure evaluation suite and server
PROSESS (PROtein Structure Evaluation Suite and Server) is a web server designed to evaluate and validate protein structures generated by X-ray crystallography, NMR spectroscopy o...
Mark V. Berjanskii, Yongjie Liang, Jianjun Zhou, P...
BMCBI
2011
14 years 10 months ago
Learning sparse models for a dynamic Bayesian network classifier of protein secondary structure
Background: Protein secondary structure prediction provides insight into protein function and is a valuable preliminary step for predicting the 3D structure of a protein. Dynamic ...
Zafer Aydin, Ajit Singh, Jeff Bilmes, William Staf...