Given a set of strings U = {T1, T2, . . . , T }, the longest common repeat problem is to find the longest common substring that appears at least twice in each string of U. We als...
We present a global search technique for nding the global minimal conformation of a sequence in Dill's HP-lattice model5;6 . The HP-lattice model is a simpli ed model of prot...
For a polygon P, the bounded Voronoi diagram of P is a partition of P into regions assigned to the vertices of P. A point p inside P belongs to the region of a vertex v if and onl...
Fixpoint expressions built from functional signatures interpreted over arbitrary complete lattices are considered. A generic notionof automatonis defined and shown, by means of a ...
We give an implementation of the Goemans-Williamson clustering procedure which is at the core of several approximation algorithms including those for Generalized Steiner Trees, Pr...
Richard Cole, Ramesh Hariharan, Moshe Lewenstein, ...