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WABI
2009
Springer
128views Bioinformatics» more  WABI 2009»
16 years 12 days ago
A General Framework for Local Pairwise Alignment Statistics with Gaps
We present a novel dynamic programming framework that allows one to compute tight upper bounds for the p-values of gapped local alignments in pseudo–polynomial time. Our algorith...
Pasi Rastas
CVPR
2009
IEEE
17 years 28 days ago
Global Optimization for Alignment of Generalized Shapes
In this paper, we introduce a novel algorithm to solve global shape registration problems. We use gray-scale “images” to represent source shapes, and propose a novel twocompo...
Hongsheng Li (Lehigh University), Tian Shen (Lehig...
172
Voted
IPMI
2009
Springer
16 years 18 days ago
Generalized L2-Divergence and Its Application to Shape Alignment
This paper proposes a novel and robust approach to the groupwise point-sets registration problem in the presence of large amounts of noise and outliers. Each of the point sets is r...
Fei Wang, Baba C. Vemuri, Tanveer Fathima Syeda-Ma...
165
Voted
PAMI
2011
15 years 23 days ago
Approximately Global Optimization for Robust Alignment of Generalized Shapes
—In this paper, we introduce a novel method to solve shape alignment problems. We use gray-scale “images” to represent source shapes, and propose a novel two-component Gaussi...
Hongsheng Li, Tian Shen, Xiaolei Huang
BMCBI
2010
90views more  BMCBI 2010»
15 years 6 months ago
Local alignment of generalized k-base encoded DNA sequence
Background: DNA sequence comparison is a well-studied problem, in which two DNA sequences are compared using a weighted edit distance. Recent DNA sequencing technologies however o...
Nils Homer, Stanley F. Nelson, Barry Merriman