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» Gene Expression Data Management: A Case Study
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NAR
2011
203views Computer Vision» more  NAR 2011»
14 years 9 months ago
Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins
The Laminin(LM)-database, hosted at http://www .lm.lncc.br, is the first database focusing a noncollagenous extracellular matrix protein family, the LMs. Part of the knowledge ava...
Daiane C. F. Golbert, Leandra Linhares-Lacerda, Lu...
BMCBI
2007
239views more  BMCBI 2007»
15 years 6 months ago
Pre-processing Agilent microarray data
Background: Pre-processing methods for two-sample long oligonucleotide arrays, specifically the Agilent technology, have not been extensively studied. The goal of this study is to...
Marianna Zahurak, Giovanni Parmigiani, Wayne Yu, R...
BMCBI
2008
130views more  BMCBI 2008»
15 years 6 months ago
Function approximation approach to the inference of reduced NGnet models of genetic networks
Background: The inference of a genetic network is a problem in which mutual interactions among genes are deduced using time-series of gene expression patterns. While a number of m...
Shuhei Kimura, Katsuki Sonoda, Soichiro Yamane, Hi...
BMCBI
2010
151views more  BMCBI 2010»
15 years 6 months ago
TF-finder: A software package for identifying transcription factors involved in biological processes using microarray data and e
Background: Identification of transcription factors (TFs) involved in a biological process is the first step towards a better understanding of the underlying regulatory mechanisms...
Xiaoqi Cui, Tong Wang, Huann-Sheng Chen, Victor Bu...
CBMS
2001
IEEE
15 years 10 months ago
Bridging Two Biomedical Journal Databases with XML-A Case Study
For transferring data between heterogeneous databases, XML is becoming a method of choice. While deployment is generally successfully, there are barriers to overcome. A recent exa...
Glenn Pearson, Chan Moon