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» Gene Expression Data Management: A Case Study
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RECOMB
2011
Springer
14 years 9 months ago
Algorithms for MDC-Based Multi-locus Phylogeny Inference
One of the criteria for inferring a species tree from a collection of gene trees, when gene tree incongruence is assumed to be due to incomplete lineage sorting (ILS), is minimize ...
Yun Yu, Tandy Warnow, Luay Nakhleh
BMCBI
2006
96views more  BMCBI 2006»
15 years 6 months ago
Bayesian detection of periodic mRNA time profiles without use of training examples
Background: Detection of periodically expressed genes from microarray data without use of known periodic and non-periodic training examples is an important problem, e.g. for ident...
Claes R. Andersson, Anders Isaksson, Mats G. Gusta...
BMCBI
2010
156views more  BMCBI 2010»
15 years 6 months ago
Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments
Background: High-throughput sequencing technologies, such as the Illumina Genome Analyzer, are powerful new tools for investigating a wide range of biological and medical question...
James H. Bullard, Elizabeth Purdom, Kasper D. Hans...
CII
2007
88views more  CII 2007»
15 years 6 months ago
Benefits of an item-centric enterprise-data model in logistics services: A case study
The paper uses a case example to present a novel way of building enterprise information systems. The objective is to bring forth the benefits of an item centric systems design in ...
Mikko Rönkkö, Mikko Kärkkäinen...
BMCBI
2006
165views more  BMCBI 2006»
15 years 6 months ago
Validation and functional annotation of expression-based clusters based on gene ontology
Background: The biological interpretation of large-scale gene expression data is one of the paramount challenges in current bioinformatics. In particular, placing the results in t...
Ralf Steuer, Peter Humburg, Joachim Selbig