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» Gene Expression Data Management: A Case Study
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BMCBI
2010
105views more  BMCBI 2010»
15 years 6 months ago
Evaluation of fecal mRNA reproducibility via a marginal transformed mixture modeling approach
Background: Developing and evaluating new technology that enables researchers to recover gene-expression levels of colonic cells from fecal samples could be key to a non-invasive ...
Nysia I. George, Joanne R. Lupton, Nancy D. Turner...
SIGMOD
2002
ACM
196views Database» more  SIGMOD 2002»
16 years 6 months ago
Storing and querying ordered XML using a relational database system
XML is quickly becoming the de facto standard for data exchange over the Internet. This is creating a new set of data management requirements involving XML, such as the need to st...
Igor Tatarinov, Stratis Viglas, Kevin S. Beyer, Ja...
ICDE
2008
IEEE
159views Database» more  ICDE 2008»
16 years 7 months ago
Fast Graph Pattern Matching
Due to rapid growth of the Internet technology and new scientific/technological advances, the number of applications that model data as graphs increases, because graphs have high e...
Jiefeng Cheng, Jeffrey Xu Yu, Bolin Ding, Philip S...
BMCBI
2010
137views more  BMCBI 2010»
15 years 6 months ago
TassDB2 - A comprehensive database of subtle alternative splicing events
Background: Subtle alternative splicing events involving tandem splice sites separated by a short (2-12 nucleotides) distance are frequent and evolutionarily widespread in eukaryo...
Rileen Sinha, Thorsten Lenser, Niels Jahn, Ulrike ...
BMCBI
2008
128views more  BMCBI 2008»
15 years 6 months ago
Efficient computation of absent words in genomic sequences
Background: Analysis of sequence composition is a routine task in genome research. Organisms are characterized by their base composition, dinucleotide relative abundance, codon us...
Julia Herold, Stefan Kurtz, Robert Giegerich