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» Gene Expression Data Management: A Case Study
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2010
15 years 8 months ago
quFiles: The Right File at the Right Time
is a unifying abstraction that simplifies data management by encapsulating different physical representations of the same logical data. Similar to a quBit (quantum bit), the parti...
Kaushik Veeraraghavan, Jason Flinn, Edmund B. Nigh...
SIGMOD
2001
ACM
114views Database» more  SIGMOD 2001»
16 years 6 months ago
The Clio Project: Managing Heterogeneity
Clio is a system for managing and facilitating the complex tasks of heterogeneous data transformation and integration. In Clio, we have collected together a powerful set of data m...
Renée J. Miller, Mauricio A. Hernández, Laura M....
BMCBI
2006
126views more  BMCBI 2006»
15 years 6 months ago
A joint model of regulatory and metabolic networks
Background: Gene regulation and metabolic reactions are two primary activities of life. Although many works have been dedicated to study each system, the coupling between them is ...
Chen-Hsiang Yeang, Martin Vingron
BMCBI
2006
144views more  BMCBI 2006»
15 years 6 months ago
More robust detection of motifs in coexpressed genes by using phylogenetic information
Background: Several motif detection algorithms have been developed to discover overrepresented motifs in sets of coexpressed genes. However, in a noisy gene list, the number of ge...
Pieter Monsieurs, Gert Thijs, Abeer A. Fadda, Sigr...
ICML
2007
IEEE
16 years 7 months ago
Recovering temporally rewiring networks: a model-based approach
A plausible representation of relational information among entities in dynamic systems such as a living cell or a social community is a stochastic network which is topologically r...
Fan Guo, Steve Hanneke, Wenjie Fu, Eric P. Xing