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» Gene Expression Data Management: A Case Study
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BMCBI
2004
100views more  BMCBI 2004»
15 years 6 months ago
Handling multiple testing while interpreting microarrays with the Gene Ontology Database
Background: The development of software tools that analyze microarray data in the context of genetic knowledgebases is being pursued by multiple research groups using different me...
Michael V. Osier, Hongyu Zhao, Kei-Hoi Cheung
CSDA
2007
108views more  CSDA 2007»
15 years 6 months ago
Diagnostics for functional regression via residual processes
We develop regression diagnostics for functional regression models which relate a functional response to predictor variables that can be multivariate vectors or random functions. ...
Jeng-Min Chiou, Hans-Georg Müller
BIBM
2008
IEEE
125views Bioinformatics» more  BIBM 2008»
15 years 6 months ago
Systems Biology via Redescription and Ontologies (III): Protein Classification Using Malaria Parasite's Temporal Transcriptomic
This paper addresses the protein classification problem, and explores how its accuracy can be improved by using information from time-course gene expression data. The methods are ...
Antonina Mitrofanova, Samantha Kleinberg, Jane Car...
CPM
2000
Springer
141views Combinatorics» more  CPM 2000»
15 years 10 months ago
A Lower Bound for the Breakpoint Phylogeny Problem
Breakpoint phylogenies methods have been shown to be an effective way to extract phylogenetic information from gene order data. Currently, the only practical breakpoint phylogeny a...
David Bryant
AAAI
2006
15 years 7 months ago
Characterizing Data Complexity for Conjunctive Query Answering in Expressive Description Logics
Description Logics (DLs) are the formal foundations of the standard web ontology languages OWL-DL and OWL-Lite. In the Semantic Web and other domains, ontologies are increasingly ...
Magdalena Ortiz, Diego Calvanese, Thomas Eiter