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RECOMB
2007
Springer
16 years 6 months ago
How to Achieve an Equivalent Simple Permutation in Linear Time
The problem of Sorting signed permutations by reversals is a well studied problem in computational biology. The first polynomial time algorithm was presented by Hannenhalli and Pev...
Simon Gog, Martin Bader
RECOMB
2006
Springer
16 years 6 months ago
Inferring Gene Orders from Gene Maps Using the Breakpoint Distance
Abstract. Preliminary to most comparative genomics studies is the annotation of chromosomes as ordered sequences of genes. Unfortunately, different genetic mapping techniques usual...
Guillaume Blin, Eric Blais, Pierre Guillon, Mathie...
RECOMB
2005
Springer
16 years 6 months ago
A Framework for Orthology Assignment from Gene Rearrangement Data
Abstract. Gene rearrangements have been used successfully in phylogenetic reconstruction and comparative genomics, but usually under the assumption that all genomes have the same g...
Krister M. Swenson, Nicholas D. Pattengale, Bernar...
CADE
2006
Springer
16 years 6 months ago
Solving Sparse Linear Constraints
Linear arithmetic decision procedures form an important part of theorem provers for program verification. In most verification benchmarks, the linear arithmetic constraints are dom...
Shuvendu K. Lahiri, Madanlal Musuvathi
OSDI
2008
ACM
16 years 6 months ago
Towards Virtual Passthrough I/O on Commodity Devices
A commodity I/O device has no support for virtualization. A VMM can assign such a device to a single guest with direct, fast, but insecure access by the guest's native device...
Lei Xia, Jack Lange, Peter A. Dinda