Sciweavers

14071 search results - page 233 / 2815
» Fundamentals of simulation modeling
Sort
View
CIBCB
2007
IEEE
16 years 29 days ago
Modeling protein-DNA binding time in Stochastic Discrete Event Simulation of Biological Processes
Abstract— This paper presents a parametric model to estimate the DNA-protein binding time using the DNA and protein structures and details of the binding site. To understand the ...
Preetam Ghosh, Samik Ghosh, Kalyan Basu, Sajal K. ...
MMAS
2011
Springer
15 years 1 months ago
Scalable Bayesian Reduced-Order Models for Simulating High-Dimensional Multiscale Dynamical Systems
While existing mathematical descriptions can accurately account for phenomena at microscopic scales (e.g. molecular dynamics), these are often high-dimensional, stochastic and thei...
Phaedon-Stelios Koutsourelakis, Elias Bilionis
APSEC
2005
IEEE
16 years 7 days ago
Architectural Style - Based Modeling and Simulation of Complex Software Systems
The design and development of complex software systems is a difficult task, and it is not easy to ensure the quality of a developed software. The paper presents an architectural ...
Ping Guo, Gregor Engels, Reiko Heckel
HYBRID
1994
Springer
15 years 10 months ago
DEVS Framework for Modelling, Simulation, Analysis, and Design of Hybrid Systems
We make the case that Discrete Event System Speci cation DEVS is a universal formalismfor discrete event dynamical systems DEDS. DEVS o ers an expressive framework for modelling, ...
Bernard P. Zeigler, Hae Sang Song, Tag Gon Kim, He...
BMCBI
2005
92views more  BMCBI 2005»
15 years 6 months ago
A restraint molecular dynamics and simulated annealing approach for protein homology modeling utilizing mean angles
Background: We have developed the program PERMOL for semi-automated homology modeling of proteins. It is based on restrained molecular dynamics using a simulated annealing protoco...
Andreas Möglich, Daniel Weinfurtner, Till Mau...