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» From Ontology to Relational Databases
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BMCBI
2008
128views more  BMCBI 2008»
15 years 6 months ago
In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer
Background: The analysis of expressed sequence tags (EST) offers a rapid and cost effective approach to elucidate the transcriptome of an organism, but requires several computatio...
Shivashankar H. Nagaraj, Robin B. Gasser, Alasdair...
FOIS
2006
15 years 7 months ago
Formalizing Ontology Alignment and its Operations with Category Theory
An ontology alignment is the expression of relations between different ontologies. In order to view alignments independently from the language expressing ontologies and from the te...
Antoine Zimmermann, Markus Krötzsch, Jé...
NAR
2011
214views Computer Vision» more  NAR 2011»
14 years 9 months ago
starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data
MicroRNAs (miRNAs) represent an important class of small non-coding RNAs (sRNAs) that regulate gene expression by targeting messenger RNAs. However, assigning miRNAs to their regu...
Jian-Hua Yang, Jun-Hao Li, Peng Shao, Hui Zhou, Yu...
WSPI
2004
15 years 7 months ago
Ontology: The Discipline and the Tool
Abstract. The fields of philosophy and informatics entertain two somewhat different conceptions of ontology. Philosophical ontology is a branch of metaphysics dating back at least ...
Doug Mayhew, Dirk Siebert
WWW
2009
ACM
16 years 7 months ago
Constructing folksonomies from user-specified relations on flickr
Automatic folksonomy construction from tags has attracted much attention recently. However, inferring hierarchical relations between concepts from tags has a drawback in that it i...
Anon Plangprasopchok, Kristina Lerman