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BMCBI
2006
93views more  BMCBI 2006»
15 years 6 months ago
A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database
Background: Many of the most popular pre-processing methods for Affymetrix expression arrays, such as RMA, gcRMA, and PLIER, simultaneously analyze data across a set of predetermi...
Simon Katz, Rafael A. Irizarry, Xue Lin, Mark Trip...
COOPIS
2004
IEEE
15 years 10 months ago
Automatic Initiation of an Ontology
We report on an a set of experiments carried out in the context of the Flemish OntoBasis project. Our purpose is to extract semantic relations from text corpora in an unsupervised ...
Marie-Laure Reinberger, Peter Spyns, A. Johannes P...
BMCBI
2008
141views more  BMCBI 2008»
15 years 6 months ago
The development of PIPA: an integrated and automated pipeline for genome-wide protein function annotation
Background: Automated protein function prediction methods are needed to keep pace with high-throughput sequencing. With the existence of many programs and databases for inferring ...
Chenggang Yu, Nela Zavaljevski, Valmik Desai, Seth...
BDA
1993
15 years 7 months ago
Querying and Updating the File
We show how structured data stored in files can benefit from standard database technology and in particular be queried and updated using database languages. We introduce the notio...
Serge Abiteboul, Sophie Cluet, Tova Milo
SEMWEB
2004
Springer
15 years 11 months ago
ORIENT: Integrate Ontology Engineering into Industry Tooling Environment
Orient is a project to develop an ontology engineering tool that integrates into existing industry tooling environments – the Eclipse platform and the WebSphere Studio developing...
Lei Zhang, Yong Yu, Jing Lu, Chenxi Lin, Kewei Tu,...