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BMCBI
2008
132views more  BMCBI 2008»
15 years 6 months ago
Exon level integration of proteomics and microarray data
Background: Previous studies comparing quantitative proteomics and microarray data have generally found poor correspondence between the two. We hypothesised that this might in par...
Danny A. Bitton, Michal J. Okoniewski, Yvonne Conn...
JAR
2006
236views more  JAR 2006»
15 years 6 months ago
Deciding Boolean Algebra with Presburger Arithmetic
We describe an algorithm for deciding the first-order multisorted theory BAPA, which combines 1) Boolean algebras of sets of uninterpreted elements (BA) and 2) Presburger arithmeti...
Viktor Kuncak, Huu Hai Nguyen, Martin C. Rinard
JCB
2006
129views more  JCB 2006»
15 years 6 months ago
GenRate: A Generative Model that Reveals Novel Transcripts in Genome-Tiling Microarray Data
Genome-wide microarray designs containing millions to hundreds of millions of probes are available for a variety of mammals, including mouse and human. These genome tiling arrays ...
Brendan J. Frey, Quaid Morris, Timothy R. Hughes
BMCBI
2007
115views more  BMCBI 2007»
15 years 6 months ago
SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis
Background: There are many fewer genes in the human genome than there are expressed transcripts. Alternative splicing is the reason. Alternatively spliced transcripts are often sp...
Ari B. Kahn, Michael C. Ryan, Hongfang Liu, Barry ...
SIGIR
2012
ACM
13 years 9 months ago
To index or not to index: time-space trade-offs in search engines with positional ranking functions
Positional ranking functions, widely used in web search engines, improve result quality by exploiting the positions of the query terms within documents. However, it is well known ...
Diego Arroyuelo, Senén González, Mau...