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PPDP
2004
Springer
15 years 11 months ago
A semantics for tracing declarative multi-paradigm programs
We introduce the theoretical basis for tracing lazy functional logic computations in a declarative multi-paradigm language like Curry. Tracing computations is a difficult task due...
Bernd Brassel, Michael Hanus, Frank Huch, Germ&aac...
PODS
2006
ACM
138views Database» more  PODS 2006»
16 years 6 months ago
Efficiently ordering subgoals with access constraints
d Abstract] Guizhen Yang Artificial Intelligence Center SRI International Menlo Park, CA 94025, USA Michael Kifer Dept. of Computer Science Stony Brook University Stony Brook, NY 1...
Guizhen Yang, Michael Kifer, Vinay K. Chaudhri
BMCBI
2006
113views more  BMCBI 2006»
15 years 6 months ago
GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima
Background: Computational discovery of transcription factor binding sites (TFBS) is a challenging but important problem of bioinformatics. In this study, improvement of a Gibbs sa...
Kazuhito Shida
BMCBI
2011
14 years 10 months ago
PeakRanger: A cloud-enabled peak caller for ChIP-seq data
Background: Chromatin immunoprecipitation (ChIP), coupled with massively parallel short-read sequencing (seq) is used to probe chromatin dynamics. Although there are many algorith...
Xin Feng, Robert Grossman, Lincoln Stein
TCBB
2011
15 years 1 months ago
Semi-Markov Models for Brownian Dynamics Permeation in Biological Ion Channels
—Constructing accurate computational models that explain how ions permeate through a biological ion channel is an important problem in biophysics and drug design. Brownian dynami...
Vikram Krishnamurthy, Kai Yiu Luk