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BMCBI
2010
172views more  BMCBI 2010»
15 years 6 months ago
Inferring gene regression networks with model trees
Background: Novel strategies are required in order to handle the huge amount of data produced by microarray technologies. To infer gene regulatory networks, the first step is to f...
Isabel A. Nepomuceno-Chamorro, Jesús S. Agu...
BMCBI
2006
86views more  BMCBI 2006»
15 years 6 months ago
Microbial identification by mass cataloging
Background: The public availability of over 180,000 bacterial 16S ribosomal RNA (rRNA) sequences has facilitated microbial identification and classification using hybridization an...
Zhengdong Zhang, George W. Jackson, George E. Fox,...
BMCBI
2006
374views more  BMCBI 2006»
15 years 6 months ago
AMDA: an R package for the automated microarray data analysis
Background: Microarrays are routinely used to assess mRNA transcript levels on a genome-wide scale. Large amount of microarray datasets are now available in several databases, and...
Mattia Pelizzola, Norman Pavelka, Maria Foti, Paol...
BMCBI
2010
121views more  BMCBI 2010»
15 years 3 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...
SIGIR
2011
ACM
14 years 9 months ago
Social context summarization
We study a novel problem of social context summarization for Web documents. Traditional summarization research has focused on extracting informative sentences from standard docume...
Zi Yang, Keke Cai, Jie Tang, Li Zhang, Zhong Su, J...